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Molecular BioSystems

Research at the interface between chemistry and the -omic sciences and systems biology.



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Issue 8 2008 Chemical Biology now published

21 July 2008

Drawing together coverage from all RSC publications, providing an overview of the latest developments in chemical biology


Non-coding RNA transcripts emanating from immunoglobulin alleles before V(D)J recombination.  The red spots are a control non-coding transcript. The green signals represent V region antisense intergenic transcripts.

Latest issue of Molecular BioSystems now published!

16 July 2008

For chemical biology, systems biology, -omics and more see the latest issue of our exciting interdisciplinary journal.


Impact factor 4.12

4.12 is new Impact Factor for Molecular BioSystems

20 June 2008

New impact factor for Molecular BioSystems is 4.12


Further News



  • Advance Articles


Contents list for Molecular BioSystems, issue 8, 2008

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Front cover
Mol. BioSyst., 2008, 4, 781
DOI: 10.1039/b811123p

front cover image for Molecular BioSystems, Issue 8, 2008

Contents and Chemical Biology
Mol. BioSyst., 2008, 4, 783
DOI: 10.1039/b811124n

Highlights

How chromatin remodelling allows shuffling of immunoglobulin heavy chain genes
Adam J. Bowen and Anne E. Corcoran,  Mol. BioSyst., 2008, 4, 790
DOI: 10.1039/b719771n
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b719771n)

This review explores the processes implicated in the shuffling of immunoglobulin heavy chain locus genes, including non-coding RNA transcription, histone modifications, transcription factors, nuclear relocation and locus contraction.

Regulation of stress hormones jasmonates and ethylene by MAPK pathways in plants
Alois Schweighofer and Irute Meskiene,  Mol. BioSyst., 2008, 4, 799
DOI: 10.1039/b718578m
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b718578m)

Jasmonates (JAs) and ethylene (ET) are plant stress hormones produced upon abiotic/biotic stress. Here, we highlight recent findings on protein phosphorylation cascades regulating their induction in plants.

Microbial cholesterol oxidases: bioconversion enzymes or signal proteins?
Jesús F. Aparicio and Juan F. Martín,  Mol. BioSyst., 2008, 4, 804
DOI: 10.1039/b717500k
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b717500k)

The recent discovery of cholesterol oxidases implicated in polyene antifungal biosynthesis expands the vast array of properties and biological roles of these fascinating enzymes.

Urinary proteomics: towards biomarker discovery, diagnostics and prognostics
Visith Thongboonkerd,  Mol. BioSyst., 2008, 4, 810
DOI: 10.1039/b802534g
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b802534g)

This article highlights and updates recent progress in the urinary proteomics field, which is moving towards biomarker discovery, diagnostics and prognostics. The concept of biomarker discovery is discussed and examples of successful clinical applications of urinary proteomics are given.

Review Articles

Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes
Young Jin Lee,  Mol. BioSyst., 2008, 4, 816
DOI: 10.1039/b801810c
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b801810c)

Chemical cross-linking of intact proteins or protein complexes followed by mass spectrometric analysis of cross-linked sites is rapidly emerging as a low resolution alternative technology that will supplement current X-ray or NMR based structural proteomics. We introduce this technology with focus on the recent advances.

Stress-related and spontaneous stage differentiation of Toxoplasma gondii
Marialice da Fonseca Ferreira da Silva, Helene S. Barbosa, Uwe Groß and Carsten G. K. Lüder,  Mol. BioSyst., 2008, 4, 824
DOI: 10.1039/b800520f
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graphical abstract image (ID: b800520f)

Developmental differentiation of the protozoan parasite Toxoplasma gondii is critical for transmission between hosts and for the pathogenesis of human toxoplasmosis. We discuss concepts and recent advances which further our knowledge of the underlying mechanisms.

Cadherins in development and cancer
Marc P. Stemmler,  Mol. BioSyst., 2008, 4, 835
DOI: 10.1039/b719215k
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graphical abstract image (ID: b719215k)

The importance of cadherin-mediated cell adhesion during embryogenesis and the inappropriate switching among family members during tumour progression is summarized with a focus on E- and N-cadherin.

Communication

Binding of a dinuclear ruthenium(II) complex to the TAR region of the HIV-AIDS viral RNA
Damian P. Buck, Caitriona B. Spillane, J. Grant Collins and F. Richard Keene,  Mol. BioSyst., 2008, 4, 851
DOI: 10.1039/b803216e
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b803216e)

Molecular modelling has identified a new RNA conformational feature created by the insertion of bulge residues into duplex regions that may act as a recognition site for small molecule binding, in particular for inert dinuclear ruthenium complexes.

Papers

Metabonomic study on ageing: NMR-based investigation into rat urinary metabolites and the effect of the total flavone of Epimedium
Bin Wu, Shikai Yan, Zhongying Lin, Qi Wang, Yun Yang, Genjin Yang, Ziyin Shen and Weidong Zhang,  Mol. BioSyst., 2008, 4, 855
DOI: 10.1039/b800923f
RSC Prospect Icon Enhanced HTML article available

graphical abstract image (ID: b800923f)

Administration of the total flavone of Epimedium can markedly influence the ageing process and shows anti-ageing effects in rats.

Characterization of a randomized FRET library for protease specificity determination
Jonathan F. Fretwell, Shams M. K. Ismail, Jeffrey M. Cummings and Thomas L. Selby,  Mol. BioSyst., 2008, 4, 862
DOI: 10.1039/b709290c
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graphical abstract image (ID: b709290c)

We describe the construction and characterization of a FRET protease library using a randomized DNA region between two donor/acceptor proteins for use in both in vivo and in vitro applications.

Back cover
Mol. BioSyst., 2008, 4, 871
DOI: 10.1039/b811125c